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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015920565.1_cds_XP_016469663.1_62192
CDS Infomation

[gene=LOC107792006] [db_xref=GeneID:107792006] [protein=serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like isoform X3] [protein_id=XP_016469663.1] [location=join(7922..8045,10789..10892,10984..11082,11398..11517,12040..12243,12891..12982,13081..13199,13339..13462,13693..13816,14408..14476,14568..14659,14742..14819,14909..14979,15105..15241)] [gbkey=CDS]
Sequence

ATGAAAGGTGGTGTTGGTGGAGATGTCGCGGCAGCTCCGGCGGGTCCACCACCGTCGCCG
TCTCTGGAATGGAAATTTTCTCAGGTTTTCGGTGAACGTACGGCTGGAGAAGAAGTGCAG
GAAGTTGATATCATTTCAGCAATTGAGTTTGATAAAACTGGTGACCATCTTGCCACCGGG
GATCGTGGGGGTAGGGTGGTATTATTTGAAAGGACCGATACCAAGGAGCATGTTGGAAGT
CGACGAGAGTTAGAGAGAGTGGACTATCCAGTCAGTCGGCATCCTGAGTTTCGCTACAAG
ACAGAATTTCAAAGCCACGAGCCTGAGTTTGATTATCTGAAGAGTTTGGAGATTGAGGAG
AAAATCAACAAGATCCGATGGTGCCAAACAGCAAATGGTGCCCTCTTTCTTCTATCTACT
AATGACAAAACTATCAAGTATTGGAAGATCCAAGAGAAGAAAGTTAAGAAAATATCTGAA
ATGAATATTGACCCTTCCAAAGCTGCTGGAAATGGCAGTGTAACCAGTTCGAGCGTATGT
TCCAGCCCAAACCAGTGTCTTGCAAATGGGGGCTATGGAGATAAATCGTACAGTTCTTTG
GGCAATGATTTGTCCTTTCCACCTGGGGGAATCCCCTCACTACGTTTGCCGGTTACAAGC
AACGAGACCAGCCTTGTTGCGAGGTGTAGAAGAGTGTATGCACATGCTCATGACTATCAT
ATCAATTCTATATCAAATAACAGTGATGGCGAAACATTCATATCAGCCGATGATCTCCGA
ATAAACCTTTGGAACTTGGAAATAAGTAATCAAAGTTTCAATATTGTGGATGTCAAGCCA
ACAAATATGGAAGATCTTACTGAGGTGATAACTTCAGCAGAATTCCATCCTACACATTGT
AACATGTTAGCTTATAGTAGTTCAAAAGGATCAGTTCGTCTAATAGATTTGCGGCAGTCA
GCATTGTGTGACTCACATTCTAAATTGTTTGAGGAACAGGAAGCACCTGGTTCAAGATCT
TTTTTCACTGAGATAATTGCTTCAATTTCAGATATTAAATTTGCAAAGAATGGACGATAC
ATACTTAGTCGTGACTACATGACCCTTAAGCTATGGGACATAAACATGGATTCTGGTCCA
GTTTCAACATTCCAGGTTCATGAATATTTAAGACCAAAGCTTTGTGACTTATACGAGAAT
GATTCCATCTTTGATAAATTCGAGTGTTGCCTTAGTGGTGATGGTATGCGAGTAGCAACT
GGATCTTACAGCAATCTTTTCCGCGTGTTTGGTTGTCCTCCGGGGAGCACTGAAGCAATT
ACCCTGGAAGCAAGCAAAAACCCTATGAGAAGGCAAGTCCAGACTCCTTCAAGGCCTTCC
AGGTCTGTGAGCAGCAGTATAACACGTGTTGTCCGGAGAGGAGCAGATAGTGCAGGTGTT
GATGCAAATGGAAACTCATTTGATTTCACAACAAAACTGCTTCATCTGGCATGGCATCCA
ACTGAAAATTCCATAGCCTGTGCTGCTGCAAACAGCTTGTACATGTATTACGTATAA

Peptide Sequence

PEP ID

XP_016469663.1
PEP Infomation

PREDICTED: serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like isoform X3 [Nicotiana tabacum]
Sequence

MKGGVGGDVAAAPAGPPPSPSLEWKFSQVFGERTAGEEVQEVDIISAIEFDKTGDHLATG
DRGGRVVLFERTDTKEHVGSRRELERVDYPVSRHPEFRYKTEFQSHEPEFDYLKSLEIEE
KINKIRWCQTANGALFLLSTNDKTIKYWKIQEKKVKKISEMNIDPSKAAGNGSVTSSSVC
SSPNQCLANGGYGDKSYSSLGNDLSFPPGGIPSLRLPVTSNETSLVARCRRVYAHAHDYH
INSISNNSDGETFISADDLRINLWNLEISNQSFNIVDVKPTNMEDLTEVITSAEFHPTHC
NMLAYSSSKGSVRLIDLRQSALCDSHSKLFEEQEAPGSRSFFTEIIASISDIKFAKNGRY
ILSRDYMTLKLWDINMDSGPVSTFQVHEYLRPKLCDLYENDSIFDKFECCLSGDGMRVAT
GSYSNLFRVFGCPPGSTEAITLEASKNPMRRQVQTPSRPSRSVSSSITRVVRRGADSAGV
DANGNSFDFTTKLLHLAWHPTENSIACAAANSLYMYYV

Transcript Sequence

Gene sequence data has not been registered.